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227. Prochniewicz, E., H.F. Chin, D.E. Hannemann, A.O. Olivares, D.D. Thomas, and E.M. De La Cruz. 2009. Myosin isoform determines the dynamics and cooperativity of actin filaments in the strongly bound actomyosin complex. J Molec Biol, accepted. AM5.
226. Becucci, L., R. Guidelli, C.B. Karim, D.D. Thomas, and G. Veglia. 2009. The role of sarcolipin and ATP in the transport of phosphate ion into the sarcoplasmic reticulum. Biophys J. 97: 2693-2699. PMCID: 2776249. PPLB-NMRFRET.
225. Agafonov R, I. V. Negrashov, Y. Tkachev, S. Blakely, M. A. Titus, D. D. Thomas, and Y. E. Nesmelov. 2009. Structural dynamics of the myosin relay helix by time-resolved EPR and FRET. Proc Nat Acad Sci USA. 106: 21625-21630. RELAYTR.
224. Hermanson, D., S.N. Addo, A.A. Bajer, J.S. Marchant, S.J.K. Das, B. Srinivasan, F. Al-Mousa, F. Michelangeli, D.D. Thomas, T.W. LeBien, and C. Xing. 2009. Dual mechanisms of sHA 14-1 in inducing cell death through endoplasmic reticulum and mitochondria. Mol Pharmacol. 76:667-78. XING.
223. Becucci, L., A. Cembran, C.B. Karim, D.D. Thomas, R. Guidelli, J. Gao, and G. Veglia. 2009. On the function of pentameric phospholamban: ion channel or storage form? Biophys J. 96:L60-62. PMCID: 2712152. PLBCHANNEL.
222. Balog, E.M., E.L. Lockamy, D.D. Thomas, and D.A. Ferrington. 2009. Site-Specific Methionine Oxidation Initiates Calmodulin Degradation by the 20S Proteasome (dagger). Biochemistry. 48: 3005-3016. PROCAM.
221. Prochniewicz, E., D. Henderson, J. M. Ervasti and D. D. Thomas. 2009. Dystrophin and utrophin have distinct effects on the structural dynamics of actin. Proc Nat Acad Sci U S A. 106:7822-7827. PMCID: 2683112. DYSACTIN.
220. Ablorh, N.A., F. Nitu, K. Engebretsen, D.D. Thomas, and J.S. Holger. 2009. Insulin-dependent rescue from cardiogenic shock is not mediated by phospholamban phosphorylation. Clin Toxicol (Phila): 47: 296-302. PHOSPHOPIG.
219. Cornea, R.L., F. Nitu, S. Gruber, K. Kohler, M. Satzer, D.D. Thomas, and B.R. Fruen. 2009. FRET-based mapping of calmodulin bound to the RyR1 Ca2+ release channel. Proc Natl Acad Sci U S A. 106: 6128-6133. PMCID: 2662960. FKFRETCaM.
218. Karon, B.S., J.D. Hoyer, J.R. Stubbs, and D.D. Thomas. 2009. Changes in Band 3 oligomeric state precede cell membrane phospholipid loss during blood bank storage of red blood cells. Transfusion. 14: 1435-1442. RBCTPA.
217. Thomas, D. D., D. Kast, and V. Korman. 2009. Site-Directed Spectroscopic Probes of Actomyosin Structural Dynamics. Annu Rev Biophys. 38:347-369. ANNREV09.
216. Mahaney, J.E., D.D. Thomas, I.K. Farrance, and J.P. Froehlich. 2008. Intermolecular interactions in the mechanism of skeletal muscle sarcoplasmic reticulum Ca(2+)-ATPase (SERCA1): evidence for a triprotomer. Biochemistry. 47: 13711-13725. CAGEDSR3.
215. Prochniewicz, E., D. Spakowicz, and D.D. Thomas. 2008. Changes in actin structural transitions associated with oxidative inhibition of muscle contraction. Biochemistry. 47: 11811-11817. OxiTPA.
214. Espinoza-Fonseca, L.M., D. Kast, and D.D. Thomas. 2008. Thermodynamic and structural basis of phosphorylation-induced disorder-to-order transition in the regulatory light chain of smooth muscle myosin. J Am Chem Soc. 130: 12208-12209. EntroP.
213. Thompson, A.R., N. Naber, C. Wilson, R. Cooke, and D.D. Thomas. 2008. Structural dynamics of the actomyosin complex probed by a bifunctional spin label that cross-links SH1 and SH2. Biophys J. 95: 5238-5246. PMCID: 2586570. BSL-S1.
212. Klein, J.C., A.R. Burr, B. Svensson, D.J. Kennedy, J. Allingham, M.A. Titus, I. Rayment, and D.D. Thomas. 2008. Actin-binding cleft closure in myosin II probed by site-directed spin labeling and pulsed EPR. Proc Natl Acad Sci U S A. 105: 12867-12872. PMCID: 2529091. CLEFT.
211. Agafonov, R.V., Y.E. Nesmelov, M.A. Titus, and D.D. Thomas. 2008. Muscle and nonmuscle myosins probed by a spin label at equivalent sites in the force-generating domain. Proc Natl Acad Sci U S A. 105: 13397-13402. PMCID: 2533201. DICTYBUNNY.
210. Nesmelov, Y.E., R.V. Agafonov, A.R. Burr, R.T. Weber, and D.D. Thomas. 2008. Structure and dynamics of the force-generating domain of myosin probed by multifrequency electron paramagnetic resonance. Biophys J. 95: 247-256. S1WX.
209. Winters, D.L., J.M. Autry, B. Svensson, and D.D. Thomas. 2008. Interdomain fluorescence resonance energy transfer in SERCA probed by cyan-fluorescent protein fused to the actuator domain. Biochemistry. 47: 4246-4256. PMCID: 2426653. CFPFITC.
208. Prochniewicz, E., D.A. Lowe, D.J. Spakowicz, L. Higgins, K. O'Conor, L.V. Thompson, D.A. Ferrington, and D.D. Thomas. 2008. Functional, structural, and chemical changes in myosin associated with hydrogen peroxide treatment of skeletal muscle fibers. Am J Physiol Cell Physiol. 294: C613-626. ACTOMYOPEROXIDE.
207. Thomas, D.D. 2007. A passion for wrestling. EPR Newsletter. 17: 6-7. EPRWRESTLING.
206. Robia, S.L., K.S. Campbell, E.M. Kelly, Z. Hou, D.L. Winters, and D.D. Thomas. 2007. Forster transfer recovery reveals that phospholamban exchanges slowly from pentamers but rapidly from the SERCA regulatory complex. Circ Res. 101: 1123-1129. PMCID: 2590498. FTR.
205. Ha, K.N., N.J. Traaseth, R. Verardi, J. Zamoon, A. Cembran, C.B. Karim, D.D. Thomas, and G. Veglia. 2007. Controlling the Inhibition of the Sarcoplasmic Ca2+-ATPase by Tuning Phospholamban Structural Dynamics. J Biol Chem. 282: 37205-37214. PLBMUTANT.
204. Surek, J.T., and D.D. Thomas. 2008. A paramagnetic molecular voltmeter. J Magn Reson. 190: 7-25. PMCID: 2266828. PRACAL.
203. Galdeen, S.A., S. Stephens, D.D. Thomas, and M.A. Titus. 2007. Talin influences the dynamics of the myosin VII-membrane interaction. Mol Biol Cell. 18: 4074-4084. PMCID: 1995725. GALDEEN.
202. Traaseth, N.J., R. Verardi, K.D. Torgersen, C.B. Karim, D.D. Thomas, and G. Veglia. 2007. Spectroscopic validation of the pentameric structure of phospholamban. Proc Natl Acad Sci U S A. 104: 14676-14681. PMCID: 1976191. PLBWT.
201. Prochniewicz, E., L.V. Thompson, and D.D. Thomas. 2007. Age-related decline in actomyosin structure and function. Exp Gerontol. 42: 931-938. PMCID: 2065766. GEROREVIEW.
200. Nesmelov, Y.E., C.B. Karim, L. Song, P.G. Fajer, and D.D. Thomas. 2007. Rotational dynamics of phospholamban determined by multifrequency electron paramagnetic resonance. Biophys J. 93: 2805-2812. PMCID: 1989693. WX.
199. Guidelli; R., L. Becucci, C. B. Karim, D. D. Thomas, and G. Veglia. 2007. An electrochemical investigation of sarcolipin reconstituted into a mercury-supported lipid bilayer. Biophys J, 93: 2678-2687. PMCID: 1989701. SLNELECTROCHEM.
197. Espinoza-Fonseca, L.M., D. Kast, and D.D. Thomas. 2007. Molecular dynamics simulations reveal a disorder-to-order transition on phosphorylation of smooth muscle myosin. Biophys J. 93: 2083-2090. PMCID: 1959561. RLCMD.
196. Karim, C.B., Z. Zhang, and D.D. Thomas. 2007. Synthesis of TOAC spin-labeled proteins and reconstitution in lipid membranes. Nat Protoc. 2: 42-49. NATUREPRO.
195. Zhang, Z., H.A. Remmer, D.D. Thomas, and C.B. Karim. 2007. Backbone dynamics determined by electron paramagnetic resonance to optimize solid-phase peptide synthesis of TOAC-labeled phospholamban. Biopolymers. 88: 29-35. ANTO.
194. Lowe, D.A., B.O. Williams, D.D. Thomas, and R.W. Grange. 2006. Molecular and cellular contractile dysfunction of dystrophic muscle from young mice. Muscle Nerve. 34: 92-100. DYSPUP.
193. Traaseth, N.J., D.D. Thomas, and G. Veglia. 2006. Effects of Ser16 Phosphorylation on the Allosteric Transitions of Phospholamban/Ca(2+)-ATPase Complex. J Mol Biol. 358: 1041-1050.
192. Karim, C.B., Z. Zhang, E.C. Howard, K.D. Torgersen, and D.D. Thomas. 2006. Phosphorylation-dependent Conformational Switch in Spin-labeled Phospholamban Bound to SERCA. J Mol Biol. 358: 1032-1040. PHOSTO.
191. Buffy, J.J., B.A. Buck-Koehntop, F. Porcelli, N.J. Traaseth, D.D. Thomas, and G. Veglia. 2006. Defining the intramembrane binding mechanism of sarcolipin to calcium ATPase using solution NMR spectroscopy. J Mol Biol. 358: 420-429. SLN+PUMP.
190. Traverse, J.H., Y.E. Nesmelov, M. Crampton, P. Lindstrom, D.D. Thomas, and R.J. Bache. 2006. Measurement of myocardial free radical production during exercise using EPR spectroscopy. Am J Physiol Heart Circ Physiol. 290: H2453-2458. AJPH290.
189. Zhang, J., B.J. Wallar, C.V. Popescu, D.B. Renner, D.D. Thomas, and J.D. Lipscomb. 2006. Methane monooxygenase hydroxylase and B component interactions. Biochemistry. 45: 2913-2926. BHINT.
188. Nesmelov, Y.E., and D.D. Thomas. 2006. Multibore sample cell increases EPR sensitivity for aqueous samples. J Magn Reson. 178: 318-324. MULTIBORE.
187. Prochniewicz, E., N. Janson, D.D. Thomas, and E.M. De la Cruz. 2005. Cofilin increases the torsional flexibility and dynamics of actin filaments. J Mol Biol. 353: 990-1000. COFILIN.
186. Korman, V.L., S.E. Anderson, E. Prochniewicz, M.A. Titus, and D.D. Thomas. 2006. Structural dynamics of the actin-myosin interface by site-directed spectroscopy. J Mol Biol. 356: 1107-1117. INTERFACE.
185. Balog, E.M., L.E. Norton, D.D. Thomas, and B.R. Fruen. 2006. Role of calmodulin methionine residues in mediating productive association with cardiac ryanodine receptors. Am J Physiol Heart Circ Physiol. 290: H794-799. METH.
184. Prochniewicz, E., D.D. Thomas, and L.V. Thompson. 2005. Age-related decline in actomyosin function. J Gerontol A Biol Sci Med Sci. 60: 425-431. ACTOMYOOLD.
183. Paterlini, M.G., and D.D. Thomas. 2005. The alpha-helical propensity of the cytoplasmic domain of phospholamban: a molecular dynamics simulation of the effect of phosphorylation and mutation. Biophys J. 88: 3243-3251. PMCID: 1305473. PLBMD.
182. Robia, S.L., N.C. Flohr, and D.D. Thomas. 2005. Phospholamban pentamer quaternary conformation determined by in-gel fluorescence anisotropy. Biochemistry. 44: 4302-4311. FLASHPLB.
181. Zamoon, J., F. Nitu, C. Karim, D.D. Thomas, and G. Veglia. 2005. Mapping the interaction surface of a membrane protein: Unveiling the conformational switch of phospholamban in calcium pump regulation. Proc Natl Acad Sci U S A. 102: 4747-4752. PMCID: 555693. PLB+PUMP.
180. Nelson, W.D., S.E. Blakely, Y.E. Nesmelov, and D.D. Thomas. 2005. Site-directed spin labeling reveals a conformational switch in the phosphorylation domain of smooth muscle myosin. Proc Natl Acad Sci U S A. 102: 4000-4005. PMCID: 554790. RLCTERM.
179. Fruen, B.R., E.M. Balog, J. Schafer, F.R. Nitu, D.D. Thomas, and R.L. Cornea. 2005. Direct detection of calmodulin tuning by ryanodine receptor channel targets using a ca(2+)-sensitive acrylodan-labeled calmodulin. Biochemistry. 44: 278-284. SKACRAM.
178. Karim, C.B., T.L. Kirby, Z. Zhang, Y. Nesmelov, and D.D. Thomas. 2004. Phospholamban structural dynamics in lipid bilayers probed by a spin label rigidly coupled to the peptide backbone. Proc Natl Acad Sci U S A. 101: 14437-14442. PMCID: 521948. TOBI.
177. Mueller, B., M. Zhao, I.V. Negrashov, R. Bennett, and D.D. Thomas. 2004. SERCA structural dynamics induced by ATP and calcium. Biochemistry. 43: 12846-12854. ATPTPA.
176. Prochniewicz, E., T.F. Walseth, and D.D. Thomas. 2004. Structural dynamics of actin during active interaction with myosin: different effects of weakly and strongly bound myosin heads. Biochemistry. 43: 10642-10652. ACTOMYOWEAK.
175. Metcalfe, E.E., J. Zamoon, D.D. Thomas, and G. Veglia. 2004. 1H/15N Heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles. Biophys J. 87: 1205-1214. PMCID: 1304459. PLBDYNAMICS.
174. Mueller, B., C.B. Karim, I.V. Negrashov, H. Kutchai, and D.D. Thomas. 2004. Direct detection of phospholamban and sarcoplasmic reticulum Ca-ATPase interaction in membranes using fluorescence resonance energy transfer. Biochemistry. 43: 8754-8765. I40APET.
173. Kirby, T.L., C.B. Karim, and D.D. Thomas. 2004. Electron paramagnetic resonance reveals a large-scale conformational change in the cytoplasmic domain of phospholamban upon binding to the sarcoplasmic reticulum Ca-ATPase. Biochemistry. 43: 5842-5852. CYSESR.
172. Mahaney, J.E., D.D. Thomas, and J.P. Froehlich. 2004. The time-dependent distribution of phosphorylated intermediates in native sarcoplasmic reticulum Ca2+-ATPase from skeletal muscle is not compatible with a linear kinetic model. Biochemistry. 43: 4400-4416. CAGEDSR2.
171. Nesmelov, Y.E., A. Gopinath, and D.D. Thomas. 2004. Aqueous sample in an EPR cavity: sensitivity considerations. J Magn Reson. 167: 138-146. AQUA.
170. Lowe, D.A., G.L. Warren, L.M. Snow, L.V. Thompson, and D.D. Thomas. 2004. Muscle activity and aging affect myosin structural distribution and force generation in rat fibers. J Appl Physiol. 96: 498-506. AFAR_STIM.
169. Zamoon, J., A. Mascioni, D.D. Thomas, and G. Veglia. 2003. NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles. Biophys J. 85: 2589-2598. PMCID: 1303482. PLBNMRSOL.
168. LaConte, L.E., J.E. Baker, and D.D. Thomas. 2003. Transient kinetics and mechanics of myosin's force-generating rotation in muscle: resolution of millisecond rotational transitions in the spin-labeled myosin light-chain domain. Biochemistry. 42: 9797-9803. SCALCAGE.
167. Buck, B., J. Zamoon, T.L. Kirby, T.M. DeSilva, C. Karim, D. Thomas, and G. Veglia. 2003. Overexpression, purification, and characterization of recombinant Ca-ATPase regulators for high-resolution solution and solid-state NMR studies. Protein Expr Purif. 30: 253-261. PLBSLN.
166. Reddy, L.G., R.L. Cornea, D.L. Winters, E. McKenna, and D.D. Thomas. 2003. Defining the molecular components of calcium transport regulation in a reconstituted membrane system. Biochemistry. 42: 4585-4592. PLBVMAX.
165. Balog, E.M., L.E. Norton, R.A. Bloomquist, R.L. Cornea, D.J. Black, C.F. Louis, D.D. Thomas, and B.R. Fruen. 2003. Calmodulin oxidation and methionine to glutamine substitutions reveal methionine residues critical for functional interaction with ryanodine receptor-1. J Biol Chem. 278: 15615-15621. CAMOX.
164. Lockwood, N.A., R.S. Tu, Z. Zhang, M.V. Tirrell, D.D. Thomas, and C.B. Karim. 2003. Structure and function of integral membrane protein domains resolved by peptide-amphiphiles: application to phospholamban. Biopolymers. 69: 283-292. AMPHI.
163. Lidke, D.S., and D.D. Thomas. 2002. Coordination of the two heads of myosin during muscle contraction. Proc Natl Acad Sci U S A. 99: 14801-14806. PMCID: 137499. SCALLET.
162. Mascioni, A., C. Karim, J. Zamoon, D.D. Thomas, and G. Veglia. 2002. Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban. J Am Chem Soc. 124: 9392-9393. PLBJACS.
161. LaConte, L.E., V. Voelz, W. Nelson, M. Enz, and D.D. Thomas. 2002. Molecular dynamics simulation of site-directed spin labeling: experimental validation in muscle fibers. Biophys J. 83: 1854-1866. PMCID: 1302278. RLCSIM.
160. Nocek, J.M., S.L. Hatch, J.L. Seifert, G.W. Hunter, D.D. Thomas, and B.M. Hoffman. 2002. Interprotein electron transfer in a confined space: uncoupling protein dynamics from electron transfer by sol-gel encapsulation. J Am Chem Soc. 124: 9404-9411. SOLGEL.
159. Lowe, D.A., D.D. Thomas, and L.V. Thompson. 2002. Force generation, but not myosin ATPase activity, declines with age in rat muscle fibers. Am J Physiol Cell Physiol. 283: C187-192. GUTHAGE.
158. Mascioni, A., C. Karim, G. Barany, D.D. Thomas, and G. Veglia. 2002. Structure and orientation of sarcolipin in lipid environments. Biochemistry. 41: 475-482. SLN NMR.
157. Thomas, D.D., E. Prochniewicz, and O. Roopnarine. 2002. Changes in actin and myosin structural dynamics due to their weak and strong interactions. Results Probl Cell Differ. 36: 7-19. CHAPTER ACTINBKI.
156. Thomas, D.D., and C.G. dos Remedios, Eds. 2002. Molecular interactions of actin. Actin-myosin interaction and actin-based regulation. Results and Problems in Cell Differentiation, Springer Verlag. ACTINBKII.
155. dos Remedios, C.G., and D.D. Thomas, Eds. 2001. Molecular interactions of actin. Actin structure and actin-binding proteins. Results and Problems in Cell Differentiation, Springer Verlag. ACTINBKI.
154. Prochniewicz, E., and D.D. Thomas. 2001. Site-specific mutations in the myosin binding sites of actin affect structural transitions that control myosin binding. Biochemistry. 40: 13933-13940. ACTMUT.
153. Nesmelov, Y.E., J.T. Surek, and D.D. Thomas. 2001. Enhanced EPR sensitivity from a ferroelectric cavity insert. J Magn Reson. 153: 7-14. FI.
152. Karim, C.B., M.G. Paterlini, L.G. Reddy, G.W. Hunter, G. Barany, and D.D. Thomas. 2001. Role of cysteine residues in structural stability and function of a transmembrane helix bundle. J Biol Chem. 276: 38814-38819. ABUTOR.
151. Hellstern, S., S. Pegoraro, C.B. Karim, A. Lustig, D.D. Thomas, L. Moroder, and J. Engel. 2001. Sarcolipin, the shorter homologue of phospholamban, forms oligomeric structures in detergent micelles and in liposomes. J Biol Chem. 276: 30845-30852. SLN.
150. Orlova, A., I.N. Rybakova, E. Prochniewicz, D.D. Thomas, J.M. Ervasti, and E.H. Egelman. 2001. Binding of dystrophin's tandem calponin homology domain to F-actin is modulated by actin's structure. Biophys J. 80: 1926-1931. PMCID: 1301381. DYSEGEL.
149. Thompson, L.V., D.A. Lowe, D.A. Ferrington, and D.D. Thomas. 2001. Electron paramagnetic resonance: a high-resolution tool for muscle physiology. Exerc Sport Sci Rev. 29: 3-6. ESSR.
148. Lowe, D.A., J.T. Surek, D.D. Thomas, and L.V. Thompson. 2001. Electron paramagnetic resonance reveals age-related myosin structural changes in rat skeletal muscle fibers. Am J Physiol Cell Physiol. 280: C540-547. AGESTRONG.
147. Baker, J.E., and D.D. Thomas. 2000. A thermodynamic muscle model and a chemical basis for A.V. Hill's muscle equation. J Muscle Res Cell Motil. 21: 335-344. THERMUS.
146. Baker, J.E., L.E. LaConte, D.D. Thomas, and I. Brust-Mascher. 2000. Muscle chemistry and force. Biophys J. 79: 1687-1688. PMCID: 1301061. MECHCHEM LET2.
145. Baker, J.E., and D.D. Thomas. 2000. Thermodynamics and kinetics of a molecular motor ensemble. Biophys J. 79: 1731-1736. PMCID: 1301067. THERMOL.
144. Karim, C.B., C.G. Marquardt, J.D. Stamm, G. Barany, and D.D. Thomas. 2000. Synthetic null-cysteine phospholamban analogue and the corresponding transmembrane domain inhibit the Ca-ATPase. Biochemistry. 39: 10892-10897. ALAMO.
143. Baker, J.E., I. Brust-Mascher, L.E. LaConte, and D.D. Thomas. 2000. Mechanochemical coupling in muscle. Biophys J. 78: 2730. PMCID: 1300862. MECHCHEM LET1.
142. Karim, C.B., L.R. Reddy, G.W. Hunter, Y.M. Angell, G. Barany, and D.D. Thomas. Chemical approach for evaluating role of the cysteine residues in pentameric phospholamban structure: effect on sarcoplasmic reticulum. in Proceedings of the Sixteenth American Peptide Symposium. 1999: Kluwer Academic Publishers, Dordrecht, The Netherlands. APS.
141. Prochniewicz, E., and D.D. Thomas. 1999. Differences in structural dynamics of muscle and yeast actin accompany differences in functional interactions with myosin. Biochemistry. 38: 14860-14867. YWT.
140. Baker, J.E., L.E. LaConte, I.I. Brust-Mascher, and D.D. Thomas. 1999. Mechanochemical coupling in spin-labeled, active, isometric muscle. Biophys J. 77: 2657-2664. MECHCHEM.
139. Brust-Mascher, I., L.E. LaConte, J.E. Baker, and D.D. Thomas. 1999. Myosin light-chain domain rotates upon muscle activation but not ATP hydrolysis. Biochemistry. 38: 12607-12613. SCALPER2.
138. Karon, B.S., J.M. Autry, Y. Shi, C.E. Garnett, G. Inesi, L.R. Jones, H. Kutchai, and D.D. Thomas. 1999. Different anesthetic sensitivities of skeletal and cardiac isoforms of the Ca-ATPase. Biochemistry. 38: 9301-9307. SERCUS.
137. Ramachandran, S., and D.D. Thomas. 1999. Rotational dynamics of the regulatory light chain in scallop muscle detected by time-resolved phosphorescence anisotropy. Biochemistry. 38: 9097-9104. SCALOPT.
136. Reddy, L.G., Y. Shi, H. Kutchai, A.G. Filoteo, J.T. Penniston, and D.D. Thomas. 1999. An autoinhibitory peptide from the erythrocyte Ca-ATPase aggregates and inhibits both muscle Ca-ATPase isoforms. Biophys J. 76: 3058-3065. PMCID: 1300275. C28R2.
135. Li, M., L.G. Reddy, R. Bennett, N.D. Silva, Jr., L.R. Jones, and D.D. Thomas. 1999. A fluorescence energy transfer method for analyzing protein oligomeric structure: application to phospholamban. Biophys J. 76: 2587-2599. PMCID: 1300228. PLBFET.
134. Reddy, L.G., J.M. Autry, L.R. Jones, and D.D. Thomas. 1999. Co-reconstitution of phospholamban mutants with the Ca-ATPase reveals dependence of inhibitory function on phospholamban structure. J Biol Chem. 274: 7649-7655. RECONST.
133. Reddy, L.G., L.R. Jones, and D.D. Thomas. 1999. Depolymerization of phospholamban in the presence of calcium pump: a fluorescence energy transfer study. Biochemistry. 38: 3954-3962. PLBASE.
132. Roopnarine, O., A.G. Szent-Gyorgyi, and D.D. Thomas. 1998. Microsecond rotational dynamics of spin-labeled myosin regulatory light chain induced by relaxation and contraction of scallop muscle. Biochemistry. 37: 14428-14436. MLCINVSL.
131. Karim, C.B., J.D. Stamm, J. Karim, L.R. Jones, and D.D. Thomas. 1998. Cysteine reactivity and oligomeric structures of phospholamban and its mutants. Biochemistry. 37: 12074-12081. CYSSULF.
130. Thomas, D.D., L.G. Reddy, C.B. Karim, M. Li, R. Cornea, J.M. Autry, L.R. Jones, and J. Stamm. 1998. Direct spectroscopic detection of molecular dynamics and interactions of the calcium pump and phospholamban. Ann N Y Acad Sci. 853: 186-194. CARDNYAS.
129. Li, M., R.L. Cornea, J.M. Autry, L.R. Jones, and D.D. Thomas. 1998. Phosphorylation-induced structural change in phospholamban and its mutants, detected by intrinsic fluorescence. Biochemistry. 37: 7869-7877. PLBTYR.
128. Corrie, J.E.T., J.E. Baker, E.M. Ostap, D.D. Thomas, and D.R. Trentham. 1998. Transient free radicals are formed during photolysis of the 1-(2-nitrophenyl) ethyl ester of adenosine triphosphate (caged ATP). J Photochem Photobiol: 49-55. RADICAL.
127. Kutchai, H., L.M. Geddis, L.R. Jones, and D.D. Thomas. 1998. Differential effects of general anesthetics on the quaternary structure of the Ca-ATPases of cardiac and skeletal sarcoplasmic reticulum. Biochemistry. 37: 2410-2421. CARHEX.
126. Baker, J.E., I. Brust-Mascher, S. Ramachandran, L.E. LaConte, and D.D. Thomas. 1998. A large and distinct rotation of the myosin light chain domain occurs upon muscle contraction. Proc Natl Acad Sci U S A. 95: 2944-2949. SCALPER.
125. Froehlich, J.P., K. Taniguchi, K. Fendler, J.E. Mahaney, D.D. Thomas, and R.W. Albers. 1997. Complex kinetic behavior in the Na,K- and Ca-ATPases. Evidence for subunit-subunit interactions and energy conservation during catalysis. Ann N Y Acad Sci. 834: 280-296. FRO.
124. Prochniewicz, E., and D.D. Thomas. 1997. Perturbations of functional interactions with myosin induce long-range allosteric and cooperative structural changes in actin. Biochemistry. 36: 12845-12853. ACTOMYO.
123. Cornea, R.L., L.R. Jones, J.M. Autry, and D.D. Thomas. 1997. Mutation and phosphorylation change the oligomeric structure of phospholamban in lipid bilayers. Biochemistry. 36: 2960-2967. BLIP.
122. Kleinschmidt, J.H., J.E. Mahaney, D.D. Thomas, and D. Marsh. 1997. Interaction of bee venom melittin with zwitterionic and negatively charged phospholipid bilayers: a spin-label electron spin resonance study. Biophys J. 72: 767-778. PMCID: 1185600. MELJORG.
121. Shi, Y., B.S. Karon, H. Kutchai, and D.D. Thomas. 1996. Phospholamban-dependent effects of C12E8 on calcium transport and molecular dynamics in cardiac sarcoplasmic reticulum. Biochemistry. 35: 13393-13399. C12E8.
120. Prochniewicz, E., Q. Zhang, P.A. Janmey, and D.D. Thomas. 1996. Cooperativity in F-actin: binding of gelsolin at the barbed end affects structure and dynamics of the whole filament. J Mol Biol. 260: 756-766. ACTGELS.
119. Roopnarine, O., and D.D. Thomas. 1996. Orientation of intermediate nucleotide states of indane dione spin-labeled myosin heads in muscle fibers. Biophys J. 70: 2795-2806. PMCID: 1225259. ADPINVSL.
118. Prochniewicz, E., Q. Zhang, E.C. Howard, and D.D. Thomas. 1996. Microsecond rotational dynamics of actin: spectroscopic detection and theoretical simulation. J Mol Biol. 255: 446-457. ACTPHOS.
117. Ostap, E.M., V.A. Barnett, and D.D. Thomas. 1995. Resolution of three structural states of spin-labeled myosin in contracting muscle. Biophys J. 69: 177-188. PMCID: 1236236. IFIBSS.
116. Karon, B.S., E.R. Nissen, J. Voss, and D.D. Thomas. 1995. A continuous spectrophotometric assay for simultaneous measurement of calcium uptake and ATP hydrolysis in sarcoplasmic reticulum. Anal Biochem. 227: 328-333. FURARED.
115. Voss, J.C., J.E. Mahaney, L.R. Jones, and D.D. Thomas. 1995. Molecular dynamics in mouse atrial tumor sarcoplasmic reticulum. Biophys J. 68: 1787-1795. PMCID: 1282081. ATVENT.
114. Roopnarine, O., and D.D. Thomas. 1995. Orientational dynamics of indane dione spin-labeled myosin heads in relaxed and contracting skeletal muscle fibers. Biophys J. 68: 1461-1471. PMCID: 1282041. CONINVSL.
113. Mahaney, J.E., J.P. Froehlich, and D.D. Thomas. 1995. Conformational transitions of the sarcoplasmic reticulum Ca-ATPase studied by time-resolved EPR and quenched-flow kinetics. Biochemistry. 34: 4864-4879. CAGEDSR.
112. Thomas, D.D., S. Ramachandran, O. Roopnarine, D.W. Hayden, and E.M. Ostap. 1995. The mechanism of force generation in myosin: a disorder-to-order transition, coupled to internal structural changes. Biophys J. 68: 135S-141S. PMCID: 1281895. BD.
111. Karon, B.S., L.M. Geddis, H. Kutchai, and D.D. Thomas. 1995. Anesthetics alter the physical and functional properties of the Ca-ATPase in cardiac sarcoplasmic reticulum. Biophys J. 68: 936-945. PMCID: 1281817. CARLID.
110. Voss, J.C., J.E. Mahaney, and D.D. Thomas. 1995. Mechanism of Ca-ATPase inhibition by melittin in skeletal sarcoplasmic reticulum. Biochemistry. 34: 930-939. MEL2.
109. Mersol, J.V., H. Kutchai, J.E. Mahaney, and D.D. Thomas. 1995. Self-association accompanies inhibition of Ca-ATPase by thapsigargin. Biophys J. 68: 208-215. PMCID: 1281678. THAPSI.
108. Karon, B.S., J.E. Mahaney, and D.D. Thomas. 1994. Halothane and cyclopiazonic acid modulate Ca-ATPase oligomeric state and function in sarcoplasmic reticulum. Biochemistry. 33: 13928-13937. HALCPA.
107. Kutchai, H., J.E. Mahaney, L.M. Geddis, and D.D. Thomas. 1994. Hexanol and lidocaine affect the oligomeric state of the Ca-ATPase of sarcoplasmic reticulum. Biochemistry. 33: 13208-13222. BOOZEOPT.
106. Roopnarine, O., and D.D. Thomas. 1994. A spin label that binds to myosin heads in muscle fibers with its principal axis parallel to the fiber axis. Biophys J. 67: 1634-1645. PMCID: 1225525. RIGINVSL.
105. Thomas, D.D., and B.S. Karon. 1994 Temperature dependence of molecular dynamics and calcium ATPase activity in sarcoplasmic reticulum. The Temperature Adaptation of Biological Membranes. A.R. Cossins. London,, Portland Press: 1-12. SRTEMP.
104. Berger, C.L., and D.D. Thomas. 1994. Rotational dynamics of actin-bound intermediates of the myosin adenosine triphosphatase cycle in myofibrils. Biophys J. 67: 250-261. PMCID: 1225355. MYANAL.
103. Voss, J., L.R. Jones, and D.D. Thomas. 1994. The physical mechanism of calcium pump regulation in the heart. Biophys J. 67: 190-196. PMCID: 1225349. PLBPHOS.
102. Thomas, D.D. 1994. Angular disorder of weak-binding actomyosin cross-bridges. Biophys J. 66: 1272-1273. PMCID: 1275848. TRINN&N.
101. Cornea, R.L., and D.D. Thomas. 1994. Effects of membrane thickness on the molecular dynamics and enzymatic activity of reconstituted Ca-ATPase. Biochemistry. 33: 2912-2920. LIPTHICK.
100. Naber, N., E.M. Ostap, D.D. Thomas, and R. Cooke. 1993. Orientation and rotational dynamics of spin-labeled phalloidin bound to actin in muscle fibers. Proteins. 17: 347-354. PHSL.
99. Birmachu, W., J.C. Voss, C.F. Louis, and D.D. Thomas. 1993. Protein and lipid rotational dynamics in cardiac and skeletal sarcoplasmic reticulum detected by EPR and phosphorescence anisotropy. Biochemistry. 32: 9445-9453. CARSKEL.
98. Karon, B.S., and D.D. Thomas. 1993. Molecular mechanism of Ca-ATPase activation by halothane in sarcoplasmic reticulum. Biochemistry. 32: 7503-7511. HALOPT.
97. Ostap, E.M., H.D. White, and D.D. Thomas. 1993. Transient detection of spin-labeled myosin subfragment 1 conformational states during ATP hydrolysis. Biochemistry. 32: 6712-6720. S1TRANS.
96. Prochniewicz, E., E. Katayama, T. Yanagida, and D.D. Thomas. 1993. Cooperativity in F-actin: chemical modifications of actin monomers affect the functional interactions of myosin with unmodified monomers in the same actin filament. Biophys J. 65: 113-123. PMCID: 1225706. COOP.
95. Thomas, D.D. 1993. Blitz and blizzard: crossbridges and chaos. Biophys J. 65: 21-22. PMCID: 1225695. GOLDN&N.
94. Roopnarine, O., K. Hideg, and D.D. Thomas. 1993. Saturation transfer electron parametric resonance of an indane-dione spin-label. Calibration with hemoglobin and application to myosin rotational dynamics. Biophys J. 64: 1896-1907. PMCID: 1262524. MYOINVSL.
93. Thomas, D.D., and J. Mahaney. 1993 The functional effects of protein and lipid dynamics in sarcoplasmic reticulum. Protein-Lipid Interactions. A. Watt, Elsevier Science Publishers B.V., North-Holland. 25: 301-320. WATTSREV.
92. Thomas, D.D., E.M. Ostap, C.L. Berger, S.M. Lewis, P.G. Fajer, and J.E. Mahaney. 1993 Transient EPR of spin-labeled proteins. EMR of Paramagnetic Molecules. L.J. Berliner and J. Reuben. New York, Plenum Press: 323-349. TEPRREV.
91. Berger, C.L., and D.D. Thomas. 1993. Rotational dynamics of actin-bound myosin heads in active myofibrils. Biochemistry. 32: 3812-3821. CATPMF.
90. Howard, E.C., K.M. Lindahl, C.F. Polnaszek, and D.D. Thomas. 1993. Simulation of saturation transfer electron paramagnetic resonance spectra for rotational motion with restricted angular amplitude. Biophys J. 64: 581-593. PMCID: 1262370. BAND.
89. Thomas, D.D., B.J. Gaffney, and O.H. Griffith. 1993. Harden M. McConnell: the science speaks for itself. Biophys J. 64: 581-593. MCCINTRO.
88. Thomas, D.D. 1993. Pollard to actomyosin: "freeze! Don't even move your head". Biophys J. 64: 297-298. PMCID: 1262332. POLLARD N&N.
87. Mahaney, J.E., J. Kleinschmidt, D. Marsh, and D.D. Thomas. 1992. Effects of melittin on lipid-protein interactions in sarcoplasmic reticulum membranes. Biophys J. 63: 1513-1522. PMCID: 1262267. MARSHMEL.
86. Ostap, E.M., T. Yanagida, and D.D. Thomas. 1992. Orientational distribution of spin-labeled actin oriented by flow. Biophys J. 63: 966-975. PMCID: 1262234. ACTOR.
85. Alessi, D.R., J.E. Corrie, P.G. Fajer, M.A. Ferenczi, D.D. Thomas, I.P. Trayer, and D.R. Trentham. 1992. Synthesis and properties of a conformationally restricted spin-labeled analog of ATP and its interaction with myosin and skeletal muscle. Biochemistry. 31: 8043-8054. ATPSL.
84. Lewis, S.M., and D.D. Thomas. 1992. Resolved conformational states of spin-labeled Ca-ATPase during the enzymatic cycle. Biochemistry. 31: 7381-7389. IASLSR.
83. Tanner, J.W., D.D. Thomas, and Y.E. Goldman. 1992. Transients in orientation of a fluorescent cross-bridge probe following photolysis of caged nucleotides in skeletal muscle fibres. J Mol Biol. 223: 185-203. IATR.
82. Berger, C.L., and D.D. Thomas. 1991. Rotational dynamics of actin-bound intermediates in the myosin ATPase cycle. Biochemistry. 30: 11036-11045. AS1AN.
81. Fajer, P.G., E.A. Fajer, M. Schoenberg, and D.D. Thomas. 1991. Orientational disorder and motion of weakly attached cross-bridges. Biophys J. 60: 642-649. PMCID: 1260107. LOWMIU.
80. Lewis, S.M., and D.D. Thomas. 1991. Microsecond rotational dynamics of spin-labeled Ca-ATPase during enzymatic cycling initiated by photolysis of caged ATP. Biochemistry. 30: 8331-8339. MSLSRCYC.
79. Voss, J., W. Birmachu, D.M. Hussey, and D.D. Thomas. 1991. Effects of melittin on molecular dynamics and Ca-ATPase activity in sarcoplasmic reticulum membranes: time-resolved optical anisotropy. Biochemistry. 30: 7498-7506. MELOPT.
78. Mahaney, J.E., and D.D. Thomas. 1991. Effects of melittin on molecular dynamics and Ca-ATPase activity in sarcoplasmic reticulum membranes: electron paramagnetic resonance. Biochemistry. 30: 7171-7180. MELEPR.
77. Ostap, E.M., and D.D. Thomas. 1991. Rotational dynamics of spin-labeled F-actin during activation of myosin S1 ATPase using caged ATP. Biophys J. 59: 1235-1241. PMCID: 1281203. CATPACT.
76. Harada, Y., K. Sakurada, T. Aoki, D.D. Thomas, and T. Yanagida. 1990. Mechanochemical coupling in actomyosin energy transduction studied by in vitro movement assay. J Mol Biol. 216: 49-68. TY.
75. Stein, R.A., R.D. Ludescher, P.S. Dahlberg, P.G. Fajer, R.L. Bennett, and D.D. Thomas. 1990. Time-resolved rotational dynamics of phosphorescent-labeled myosin heads in contracting muscle fibers. Biochemistry. 29: 10023-10031. EOFIB.
74. Fajer, P.G., E.A. Fajer, and D.D. Thomas. 1990. Myosin heads have a broad orientational distribution during isometric muscle contraction: time-resolved EPR studies using caged ATP. Proc Natl Acad Sci U S A. 87: 5538-5542. PMCID: 54360. CATPFIB.
73. Fajer, P.G., E.A. Fajer, J.J. Matta, and D.D. Thomas. 1990. Effect of ADP on the orientation of spin-labeled myosin heads in muscle fibers: a high-resolution study with deuterated spin labels. Biochemistry. 29: 5865-5871. ADP.
72. Birmachu, W., and D.D. Thomas. 1990. Rotational dynamics of the Ca-ATPase in sarcoplasmic reticulum studied by time-resolved phosphorescence anisotropy. Biochemistry. 29: 3904-3914. PHOSTEMP.
71. Fajer, P.G., R.L.H. Bennett, C.F. Polnaszek, E.A. Fajer, and D.D. Thomas. 1990. General method for multiparameter fitting of high-resolution EPR spectra using a simplex algorithm. J. Magn. Res. 88: 111-125. AMOEBA.
70. Lamche, H.R., P.T. Silberstein, A.C. Knabe, D.D. Thomas, H.S. Jacob, and D.E. Hammerschmidt. 1990. Steroids decrease granulocyte membrane fluidity, while phorbol ester increases membrane fluidity. Studies using electron paramagnetic resonance. Inflammation. 14: 61-70. STEROIDS.
69. Ervasti, J.M., J.R. Mickelson, S.M. Lewis, D.D. Thomas, and C.F. Louis. 1989. An electron paramagnetic resonance study of skeletal muscle membrane fluidity in malignant hyperthermia. Biochim Biophys Acta. 986: 70-74. ERVASTI.
68. Berger, C.L., E.C. Svensson, and D.D. Thomas. 1989. Photolysis of a photolabile precursor of ATP (caged ATP) induces microsecond ratational motions of myosin heads bound to actin. Proc Natl Acad Sci U S A. 86: 8753-8757. PMCID: 298368. CATPAS1.
67. Squier, T.C., and D.D. Thomas. 1989. Selective detection of the rotational dynamics of the protein-associated lipid hydrocarbon chains in sarcoplasmic reticulum membranes. Biophys J. 56: 735-748. PMCID: 1280530. STLIP.
66. Leder, R.O., S.L. Helgerson, and D.D. Thomas. 1989. The transverse location of the retinal chromophore in the purple membrane by diffusion-enhanced energy transfer. J Mol Biol. 209: 683-701. PURPLE.
65. Barnett, V.A., and D.D. Thomas. 1989. Microsecond rotational motion of spin-labeled myosin heads during isometric muscle contraction. Saturation transfer electron paramagnetic resonance. Biophys J. 56: 517-523. PMCID: 1280504. STFIB.
64. Birmachu, W., F.L. Nisswandt, and D.D. Thomas. 1989. Conformational transitions in the calcium adenosinetriphosphatase studied by time-resolved fluorescence resonance energy transfer. Biochemistry. 28: 3940-3947. FETSR.
63. Squier, T.C., D.J. Bigelow, and D.D. Thomas. 1988. Lipid fluidity directly modulates the overall protein rotational mobility of the Ca-ATPase in sarcoplasmic reticulum. J Biol Chem. 263: 9178-9186. ARII.
62. Squier, T.C., and D.D. Thomas. 1988. Relationship between protein rotational dynamics and phosphoenzyme decomposition in the sarcoplasmic reticulum Ca-ATPase. J Biol Chem. 263: 9171-9177. DEL.
61. Squier, T.C., S.E. Hughes, and D.D. Thomas. 1988. Rotational dynamics and protein-protein interactions in the Ca-ATPase mechanism. J Biol Chem. 263: 9162-9170. XLSR.
60. Fajer, P.G., E.A. Fajer, N.J. Brunsvold, and D.D. Thomas. 1988. Effects of AMPPNP on the orientation and rotational dynamics of spin-labeled muscle cross-bridges. Biophys J. 53: 513-524. PMCID: 1330225. AMPPNP.
59. Ludescher, R.D., and D.D. Thomas. 1988. Microsecond rotational dynamics of phosphorescent-labeled muscle cross-bridges. Biochemistry. 27: 3343-3351. EOMF.
58. Thomas, D.D., P.G. Fajer, E.A. Fajer, N.J. Brunsvold, and E.C. Svensson. 1988. EPR evidence for nucleotide effects on attached cross-bridges. Adv Exp Med Biol. 226: 241-253. SUGI.
57. Ludescher, R.D., T.M. Eads, and D.D. Thomas. 1988. Ionic effects on the rotational dynamics of cross-bridges in myosin filaments, measured by triplet absorption anisotropy. J Mol Biol. 200: 89-99. EOMYOG.
56. Strasburg, G.M., M. Hogan, W. Birmachu, D.D. Thomas, and C.F. Louis. 1988. Site-specific derivatives of wheat germ calmodulin. Interactions with troponin and sarcoplasmic reticulum. J Biol Chem. 263: 542-548. CM.
55. Thatte, H.S., P.B. Addis, D.D. Thomas, D.J. Bigelow, J.R. Mickelson, and C.F. Louis. 1987. Temperature-dependent abnormalities of the erythrocyte membrane in porcine malignant hyperthermia. Biochem Med Metab Biol. 38: 366-377.. MHRBC.
54. Ludescher, R.D., T.M. Eads, and D.D. Thomas. 1987 Triplet anisotropy studies of restricted rotational motion in myosin monomers and filaments. Optical Studies of Muscle Cross-Bridges. R.J. Baskin and Y. Yeh. Boca raton, Florida, CRC Press: 33-65. CRC.
53. Bigelow, D.J., and D.D. Thomas. 1987. Rotational dynamics of lipid and the Ca-ATPase in sarcoplasmic reticulum. The molecular basis of activation by diethyl ether. J Biol Chem. 262: 13449-13456. ETHER.
52 Thomas, D.D. 1987 Detection of time-resolved microsecond molecular dynamics by optical and magnetic resonance spectroscopy. Structure, Dynamics, and Function of Biomolecules. A. Ehrenberg, R. Rigler, A. Graslund and L. Nilsson. Berlin, Springer Verlag: 140-144. SWEDEN.
51. Barnett, V.A., and D.D. Thomas. 1987. Resolution of conformational states of spin-labeled myosin during steady-state ATP hydrolysis. Biochemistry. 26: 314-323. IASLMYO.
50. Thomas, D.D. 1987. Spectroscopic probes of muscle cross-bridge rotation. Annu Rev Physiol. 49: 691-709. ARP.
49. Fajer, P., D.D. Thomas, J.B. Feix, and J.S. Hyde. 1986. Measurement of rotational molecular motion by time-resolved saturation transfer electron paramagnetic resonance. Biophys J. 50: 1195-1202. PMCID: 1329792. TRSTEPR.
48. Svensson, E.C., and D.D. Thomas. 1986. ATP induces microsecond rotational motions of myosin heads crosslinked to actin. Biophys J. 50: 999-1002. PMCID: 1329825. XLAS1.
47. Lewis, S.M., and D.D. Thomas. 1986. Effects of vanadate on the rotational dynamics of spin-labeled calcium adenosinetriphosphatase in sarcoplasmic reticulum membranes. Biochemistry. 25: 4615-4621. ViSR.
46. Thomas, D.D. 1986. Molecular dynamics resolved. Nature. 321: 539-540. PRODREV.
45. Sommerville, L.E., R.M. Resnick, D.D. Thomas, and G.L. Nelsestuen. 1986. Terbium probe of calcium-binding sites on the prothrombin-membrane complex. J Biol Chem. 261: 6222-6229. LESTB.
44. Squier, T.C., and D.D. Thomas. 1986. Applications of new saturation transfer electron paramagnetic resonance methodology to the rotational dynamics of the Ca-ATPase in sarcoplasmic reticulum membranes. Biophys J. 49: 937-942. PMCID: 1329544. Hb2 APPLICATION.
43. Squier, T.C., and D.D. Thomas. 1986. Methodology for increased precision in saturation transfer electron paramagnetic resonance studies of rotational dynamics. Biophys J. 49: 921-935. PMCID: 1329543. NEW TESTAMENT (Hb1 METHOD).
42. Bigelow, D.J., T.C. Squier, and D.D. Thomas. 1986. Temperature dependence of rotational dynamics of protein and lipid in sarcoplasmic reticulum membranes. Biochemistry. 25: 194-202. ARRI.
41. Barnett, V.A., P.G. Fajer, C.F. Polnaszek, and D.D. Thomas. 1986. High-resolution detection of muscle crossbridge orientation by electron paramagnetic resonance. Biophys J. 49: 144-147. BDEPR.
40. Thomas, D.D. 1986 Rotational diffusion of membrane proteins. Techniques for Analysis of Membrane Proteins. R. Cherry and I. Ragan. London, Chapman Hall: 377-431. CHREV.
39. Sommerville, L.E., D.D. Thomas, and G.L. Nelsestuen. 1985. Tb3+ binding to bovine prothrombin and bovine prothrombin fragment 1. J Biol Chem. 260: 10444-10452. TBBP.
38. Thomas, D.D., T.M. Eads, V.A. Barnett, K.M. Lindahl, D.A. Momont, and T.C. Squier. 1985 Saturation transfer EPR and triplet anisotropy: complementary techniques for the study of microsecond rotational dynamics. Spectroscopy and the Dynamics of Biological Systems. P.M. Bayley and R.E. Dale. London, Academic Press. STEPRTREV.
37. Thomas, D.D. 1985 Saturation transfer EPR studies of microsecond rotational motions in biological membranes. Enzymes of Biological Membranes. A. Martonosi. New York, Plenum Press: 287-312. EBMREV.
36. Cooke, R., M.S. Crowder, C.H. Wendt, V.A. Barnett, and D.D. Thomas. 1984. Muscle cross-bridges: do they rotate? Adv Exp Med Biol. 170: 413-427. SEATTLE.
35. Thomas, D.D., R. Cooke, and V.A. Barnett. 1984. Comment on 'Geometrical constraints affecting crossbridge formation in insect flight muscle'. J Muscle Res Cell Motil. 5: 589-590. IFM H&R.
34. Barnett, V.A., and D.D. Thomas. 1984. Saturation transfer electron paramagnetic resonance of spin-labeled muscle fibers. Dependence of myosin head rotational motion on sarcomere length. J Mol Biol. 179: 83-102. SF.
33. Eads, T.M., D.D. Thomas, and R.H. Austin. 1984. Microsecond rotational motions of eosin-labeled myosin measured by time-resolved anisotropy of absorption and phosphorescence. J Mol Biol. 179: 55-81. EOMYO.
32. Thomas, D.D., R. Cooke, and V.A. Barnett. 1983. Orientation and rotational mobility of spin-labelled myosin heads in insect flight muscle in rigor. J Muscle Res Cell Motil. 4: 367-378. IFM.
31. Thomas, D.D., C.H. Wendt, W. Francisz, and J.S. Hyde. 1983. Saturation transfer EPR spectroscopy on spin-labeled muscle fibers using a loop-gap resonator. Biophys J. 43: 131-135. PMCID: 1329277. LGF.
30. Thomas, D.D. 1983. Rotational dynamics of spin-labelled muscle proteins. Ciba Found Symp. 93: 169-185. CIBA.
29. Thomas, D.D. 1982 Saturation transfer EPR studies of rotational dynamics in membranes. Membranes and Transport. A. Martonosi. New York, Plenum Press: 135-139. MEMTRANS.
28. Cooke, R., M.S. Crowder, and D.D. Thomas. 1982. Orientation of spin labels attached to cross-bridges in contracting muscle fibres. Nature. 300: 776-778. NATURE.
27. Stryer, L., D.D. Thomas, and C.F. Meares. 1982. Diffusion-enhanced fluorescence energy transfer. Annu Rev Biophys Bioeng. 11: 203-222. RDLREV (ARBB).
26. Stryer, L., D.D. Thomas, and W.F. Carlsen. 1982. Fluorescence energy transfer measurements of distances in rhodopsin and the purple membrane protein. Methods Enzymol. 81: 668-678. RDLREV (MIE).
25. Thomas, D.D., and L. Stryer. 1982. Transverse location of the retinal chromophore of rhodopsin in rod outer segment disc membranes. J Mol Biol. 154: 145-157. ROS.
24. Thomas, D.D., D.J. Bigelow, T.C. Squier, and C. Hidalgo. 1982. Rotational dynamics of protein and boundary lipid in sarcoplasmic reticulum membrane. Biophys J. 37: 217-225. PMCID: 1329127. BJDISC.
23. Quintanilha, A.T., D.D. Thomas, and M.S. Swanson. 1982. Protein-lipid interactions within purified and reconstituted cytochrome c reductase and oxidase. Biophys J. 37: 68-69. PLICOx.
22. Thomas, D.D. 1981 Orientation and rotational dynamics of spin-labeled muscle crossbridges. Protein Dynamics and Energy Transduction. S. Ishiwata. TANIGUCHI.
21. Hyde, J.S., and D.D. Thomas. 1980. Saturation transfer spectroscopy. Ann Rev Phys Chem. 31: 293-317. ARPC.
20. Thomas, D.D., and R. Cooke. 1980. Orientation of spin-labeled myosin heads in glycerinated muscle fibers. Biophys J. 32: 891-906. PMCID: 1327379. FIBERS.
19. Thomas, D.D., S. Ishiwata, J.C. Seidel, and J. Gergely. 1980. Sub-millisecond rotational dynamics of spin-labeled myosin heads in myofibrils. Biophys J. 32: 873-889. PMCID: 1327378. MF.
18. Swanson, M.S., A.T. Quintanilha, and D.D. Thomas. 1980. Protein rotational mobility and lipid fluidity of purified and reconstituted cytochrome c oxidase. J Biol Chem. 255: 7494-7502. COx.
17. Thomas, D.D., J.C. Seidel, and J. Gergely. 1979. Rotational dynamics of spin-labeled F-actin in the sub-millisecond time range. J Mol Biol. 132: 257-273. ACTIN.
16. Thomas, D.D., W.F. Carlsen, and L. Stryer. 1978. Fluorescence energy transfer in the rapid-diffusion limit. Proc Natl Acad Sci U S A. 75: 5746-5750. FET.
15. Thomas, D.D. 1978. Large-scale rotational motions of proteins detected by electron paramagnetic resonance and fluorescence. Biophys J. 24: 439-462. PMCID: 1473419. THOMAS '78.
14. Thomas, D.D., and C. Hidalgo. 1978. Rotational motion of the sarcoplasmic reticulum Ca2+-ATPase. Proc Natl Acad Sci U S A. 75: 5488-5492. PMCID: 392990. SR PNAS.
13. Hidalgo, C., D.D. Thomas, and N. Ikemoto. 1978. Effect of the lipid environment on protein motion and enzymatic activity of sarcoplasmic reticulum calcium ATPase. J Biol Chem. 253: 6879-6887. SR JBC.
12. Devaux, P.F., A. Baroin, A. Bienvenue, E. Favre, A. Rousselet, and D.D. Thomas. 1977. Rotational diffusion of various membrane bound proteins by saturation transfer EPR spectroscopy. In Membrane Bioenergetics, L. Packer, et al., editors. Academic Press, New York.: 47-54. BM.
11. Hidalgo, C., and D.D. Thomas. 1977. Heterogeneity of SH groups in sarcoplasmic reticulum. Biochem Biophys Res Commun. 78: 1175-1182. SR BBRC.
10. Baroin, A., D.D. Thomas, B. Osborne, and P.F. Devaux. 1977. Saturation transfer electron paramagnetic resonance on membrane-bound proteins. I-Rotational diffusion of rhodopsin in the visual receptor membrane. Biochem Biophys Res Commun. 78: 442-447. BBRC.
9. Thomas, D.D. 1977. Saturation transfer EPR. Trends Biochem Sci. 2: N62-N63. TIBS.
8. Thomas, D.D., J.C. Seidel, and J. Gergely. 1976. Molecular motions and the mechanism of muscle contraction and its regulation. in Contractile Systems in Nonmuscle Cells. S.V. Perry, et al., editors. Elsevier, North-Holland Biomedical Press. : 13-21. THOMAS '76.
7. Thomas, D.D., L.R. Dalton, and J.S. Hyde. 1976. Rotational diffusion studied by passage saturation transfer electron paramagnetic resonance. J Chem Phys. 65: 3006-3024. OLD TESTAMENT.
6. Thomas, D.D. 1976. Rotational dynamics in spin-labeled biomacromolecular assemblies: saturation transfer electron paramagnetic resonance. Ph. D. Thesis. Stanford University. THESIS.
5. Thomas, D.D., J.C. Seidel, J. Gergely, and J.S. Hyde. 1975. The quantitative measurement of rotational motion of the subfragment-1 region of myosin by saturation transfer epr spectroscopy. J Supramol Struct. 3: 376-390. THOMAS '75b.
4. Thomas, D.D., J.C. Seidel, J.S. Hyde, and J. Gergely. 1975. Motion of subfragment-1 in myosin and its supramolecular complexes: saturation transfer electron paramagnetic resonance. Proc Natl Acad Sci U S A. 72: 1729-1733. PMCID: 432619. STMYO.
3. Thomas, D.D., and H.M. McConnell. 1974. Calculation of paramagnetic resonance spectra sensitive to very slow rotational motion. Chem Phys Lett. 25: 470-475. THOMAS '74.
2. Hyde, J.S., and D.D. Thomas. 1973. New EPR methods for the study of very slow motion: application to spin-labeled hemoglobin. Ann N Y Acad Sci. 222: 680-692. HYDE '73.
1. Loew, G.H., and D.D. Thomas. 1972. Molecular orbital calculations of the catalytic effect of lysozyme. I. Glu 35 as general acid catalyst. J Theor Biol. 36: 89-104. LOEW '72.